6-Methylthiopurine 5'-monophosphate ribonucleotide

A summary of the most common chemical descriptors (InChI Key and SMILES codes) for 6-Methylthiopurine 5'-monophosphate ribonucleotide are summarized together with 3D and 2D structures and relevant physico-chemical properties.

What is the 6-Methylthiopurine 5'-monophosphate ribonucleotide?

The molecule 6-Methylthiopurine 5'-monophosphate ribonucleotide presents a molecular formula of C11H15N4O7PS and its IUPAC name is [(2R,3S,4R,5R)-3,4-dihydroxy-5-(6-methylsulfanylpurin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate.

Methylthiopurine 5'-monophosphate ribonucleotide (MPR) is a molecule that participes in the regulation of gene expression. MPR is a nucleotide that belongs in the nucleus of cells and is required for the proper function of the cell's DNA. MPR is essential for the proper regulation of gene expression and is required for the proper development and function of the cell. MPR is also required for the proper maintenance of the cell's genome..

3D structure

Cartesian coordinates

Geometry of 6-Methylthiopurine 5'-monophosphate ribonucleotide in x, y and z coordinates (Å units) to copy/paste elsewhere. Generated with Open Babel software.

2D drawing

 

6-Methylthiopurine 5'-monophosphate ribonucleotide BMYFUCYXRGTQQL-IOSLPCCCSA-N chemical compound 2D structure molecule svg
6-Methylthiopurine 5'-monophosphate ribonucleotide

 

Molecule descriptors

 
IUPAC name[(2R,3S,4R,5R)-3,4-dihydroxy-5-(6-methylsulfanylpurin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate
InChI codeInChI=1S/C11H15N4O7PS/c1-24-10-6-9(12-3-13-10)15(4-14-6)11-8(17)7(16)5(22-11)2-21-23(18,19)20/h3-5,7-8,11,16-17H,2H2,1H3,(H2,18,19,20)/t5-,7-,8-,11-/m1/s1
InChI KeyBMYFUCYXRGTQQL-IOSLPCCCSA-N
SMILESCSc1ncnc2c1ncn2[C@@H]1O[C@H](COP(=O)(O)O)[C@@H](O)[C@H]1O

Other names (synonyms)

IUPAC nomenclature provides a standardized method for naming chemical compounds. Although this system is widely used in chemistry, many chemical compounds have also other names commonly used in different contexts. These synonyms can come from a variety of sources and are used for a variety of purposes.

One common source of synonyms for chemical compounds is the common or trivial names, assigned on the basis of appearance, properties, or origin of the molecule.

Another source of synonyms are historical or obsolete names employed in the past, however replaced nowadays by more modern or standardized names.

In addition to common and historical names, chemical compounds may also have synonyms that are specific to a particular field or industry.

  • 6-Methylthioinosine-5'-monophosphate
  • 6-Methylthiopurine 5'-monophosphate ribonucleotide
  • Q27149655
  • S-methylthioinosine monophosphate

Reference codes for other databases

There exist several different chemical codes commonly used in orded to identify molecules:
  • CHEBI:80609

Physico-Chemical properties

IUPAC name[(2R,3S,4R,5R)-3,4-dihydroxy-5-(6-methylsulfanylpurin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate
Molecular formulaC11H15N4O7PS
Molecular weight378.298
Melting point (ºC)
Boiling point (ºC)
Density (g/cm3)
Molar refractivity80.90
LogP-0.7
Topological polar surface area195.2

LogP and topological polar surface area (TPSA) values were estimated using Open Babel software.

The n-octanol/water partition coeficient (Kow) data is applied in toxicology and drug research. Kow values are used, to guess the environmental fate of persistent organic pollutants. High partition coefficients values, tend to accumulate in the fatty tissue of organisms. Molecules with a log(Kow) (or LogP) greater than 5 are considered to bioaccumulate.

TPSA values are the sum of the surface area over all polar atoms or molecules, mainly oxygen and nitrogen, also including hydrogen atoms.

In medicinal chemistry, TPSA is used to assess the ability of a drug to permeabilise cells.

For molecules to penetrate the blood-brain barrier (and act on receptors in the central nervous system), TPSA values below 90 Å2 are required. Thus, molecules with a polar surface area greater than 140 Å2 tend to be poorly permeable to cell membranes.