undecane

A summary of the most common chemical descriptors (InChI Key and SMILES codes) for undecane are summarized together with 3D and 2D structures and relevant physico-chemical properties.

What is undecane?

The molecule undecane presents a molecular formula of C11H24 and its IUPAC name is undecane.

3D structure

Cartesian coordinates

Geometry of undecane in x, y and z coordinates (Å units) to copy/paste elsewhere. Generated with Open Babel software.

2D drawing

 

undecane RSJKGSCJYJTIGS-UHFFFAOYSA-N chemical compound 2D structure molecule svg
undecane

 

Molecule descriptors

 
IUPAC nameundecane
InChI codeInChI=1S/C11H24/c1-3-5-7-9-11-10-8-6-4-2/h3-11H2,1-2H3
InChI KeyRSJKGSCJYJTIGS-UHFFFAOYSA-N
SMILESCCCCCCCCCCC

Physico-Chemical properties

IUPAC nameundecane
Molecular formulaC11H24
Molecular weight156.31
Melting point (ºC)
Boiling point (ºC)
Density (g/cm3)
Molar refractivity
LogP
Topological polar surface area0

LogP and topological polar surface area (TPSA) values were estimated using Open Babel software.

The n-octanol/water partition coeficient (Kow) data is applied in toxicology and drug research. Kow values are used, to guess the environmental fate of persistent organic pollutants. High partition coefficients values, tend to accumulate in the fatty tissue of organisms. Molecules with a log(Kow) (or LogP) greater than 5 are considered to bioaccumulate.

TPSA values are the sum of the surface area over all polar atoms or molecules, mainly oxygen and nitrogen, also including hydrogen atoms.

In medicinal chemistry, TPSA is used to assess the ability of a drug to permeabilise cells.

For molecules to penetrate the blood-brain barrier (and act on receptors in the central nervous system), TPSA values below 90 Å2 are required. Thus, molecules with a polar surface area greater than 140 Å2 tend to be poorly permeable to cell membranes.